BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014H11LP1|AL426757
(805 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1277 716 0.0
>3x_Contig1277
Length = 5748
Score = 716 bits (361), Expect = 0.0
Identities = 400/413 (96%)
Strand = Plus / Plus
Query: 393 gacatcgtcccactagaagaagctgatgcgtgtggtatgaatttatatggtatagaaaag 452
||||||||||||| ||||||||||||||||||||| | ||| | |||| | |||||||
Sbjct: 515 gacatcgtcccaccagaagaagctgatgcgtgtggcaagaacccacatggcaaagaaaag 574
Query: 453 cacgaattcaacgaggacttactctcggtagttgatgaagacatcgcctcaatcaaaagg 512
|||||||||||||||||| || | |||||||||||||||||||||||||||||||||||
Sbjct: 575 cacgaattcaacgaggacccacccccggtagttgatgaagacatcgcctcaatcaaaagg 634
Query: 513 aaattgttcgatccaccgacatctagcgacgaaccaaagagtttgggaccagtgtcgact 572
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 635 aaattgttcgatccaccgacatctagcgacgaaccaaagagtttgggaccagtgtcgact 694
Query: 573 tatttccaggagaaatacggcgtaaatccggattgtcagatctaccctttcactggtgac 632
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 695 tatttccaggagaaatacggcgtaaatccggattgtcagatctaccctttcactggtgac 754
Query: 633 aatttggctaccatctgttcgttaccactacaaaaaaacgatgtattaatatcgctgggt 692
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 755 aatttggctaccatctgttcgttaccactacaaaaaaacgatgtattaatatcgctgggt 814
Query: 693 acctcaactacgatcctcttgataacggatcagtaccattcgtcaccaaattaccatttg 752
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 815 acctcaactacgatcctcttgataacggatcagtaccattcgtcaccaaattaccatttg 874
Query: 753 ttcatccatccaacggtgccaaatcattacatgggtatgatctgttattgtaa 805
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 875 ttcatccatccaacggtgccaaatcattacatgggtatgatctgttattgtaa 927
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5422
Number of Sequences: 1807
Number of extensions: 5422
Number of successful extensions: 48
Number of sequences better than 1.0e-20: 1
length of query: 805
length of database: 10,358,551
effective HSP length: 16
effective length of query: 789
effective length of database: 10,329,639
effective search space: 8150085171
effective search space used: 8150085171
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)